PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT27713
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 815aa    MW: 90796.1 Da    PI: 4.7918
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT27713genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM42.71.7e-13732181128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpk..................kvkaeekewyfFskrdkkyatgkr 73 
               lp+G++F+P+d++l+  +L++++ +        +  +e+ik+ d       ++P+d+p                    ++++ + +yfF+k+ +  ++++ 
  EMT27713  73 LPRGVEFNPSDSDLL-WHLAAEMGNGLahrhpfI--SEFIKSGDegarFGCTHPRDMPGllerdaiqlmqtvdvsinGMRQDGHALYFFHKKVNLDNNEND 170
               699************.667777665553454331..3345544334448889*****95589999999998888766555567788****99887655333 PP

       NAM  74 knratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 +   +  W+++  +++++  +g l g+k+t+++y + ++++++tdW +h y +
  EMT27713 171 --K---DISWQKSAPSRSIIL-DGGLRGCKETFALY-AFKNSPRRTDWELHRYYI 218
               ..3...335************.999***********.5667779********975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.66E-1666236IPR003441NAC domain
PROSITE profilePS5100518.58873236IPR003441NAC domain
PfamPF023652.6E-674217IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 815 aa     Download sequence    Send to blast
MAFDIDSLPP LLGPDSDSDS DSDHLPPAPR RGRPLRPPPA PRVEPSPPAP RRCEATPAPE  60
GTGGAAQQSW PGLPRGVEFN PSDSDLLWHL AAEMGNGLAH RHPFISEFIK SGDEGARFGC  120
THPRDMPGLL ERDAIQLMQT VDVSINGMRQ DGHALYFFHK KVNLDNNEND KDISWQKSAP  180
SRSIILDGGL RGCKETFALY AFKNSPRRTD WELHRYYIKN IMENEGELVL SKVFYKSQKG  240
HCECAAKASL QSAQDNSVTD DDSREEKEDT QLEKLSVNMA TESNGNNQEQ MLVEMYPDQD  300
KPCSLKHVLD TADVNHENQI NDQAETELDH MSLQDRYRIL LADMRSCSAR ASAEKCALND  360
MGNSSMQMDA ETSGPVPKSE IDEMYGSFLA VYVFIPVTLI NFLFCNVGYR NHEGTAYREC  420
SVNGKEIPVE DTEGPVNDKA FNSSAELLLS QTPACGDENV QLAPRNSGTY LVDVKTEPAL  480
DGYAIYPSDS PVKFHHSNND GLKVSGSILE CVPKDAEDSL PSLGVKSELS GYELPGLCEN  540
SFISSMEPIV KKLHTRTLNC NGGLAPCSRQ RKKRDSSEKV LEEDGYKNDE GIPYPSRQKR  600
KKKTATNYVC RDSIETALEE DAPGLLQILL DKGIVVKEIK LYDVVEDDEM LPDCTESDFQ  660
DLENVITKLF PQRTSLLKSV AKHGKGGKAI YCLACLISLI EQSVPIEWQI RRMVTAMKLS  720
SCGRTALIEN RPLLIGEDLS EGEAKVLQEY GWIPNTGLGT LLNYRDRVVH DRWNEKYSTD  780
WRMKIGKLLM NGYSEGELII THVPLNSEEI KSENP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3724600.0AK372460.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3002I07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010228958.10.0PREDICTED: uncharacterized protein LOC100826588 isoform X2
TrEMBLM8C0Z20.0M8C0Z2_AEGTA; NAC domain-containing protein 8
STRINGMLOC_50895.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP74793239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.13e-29NAC family protein